Education
Ph.D., Ecole Polytechnique Federale De Lausanne (EPFL)
- School:Engineering
- Department:Electrical Engineering
- Speciality:Optics
- Thesis:Advanced Techniques in Optical Diffraction Tomography
- Supervisor:Prof. Demetri Psaltis
MSC., American University in Cairo (AUC)
- School:Sciences & Engineering
- Department:Physics
- Speciality:Optics
- Thesis:NanoPhotonic structures for biosensing applications
- Supervisor:Prof. Mohamed Swillam
BSC., Alexandria University
- Faculty:Engineering
- Department:Electrical Engineering
- Division:Communication and Electronics
- Grade:Very Good
Publications
Peer-Reviewed Journals
Ahmed B. Ayoub, A Saba, C Gigli, D Psaltis, “Optical Diffraction Tomography based on 3D Physics-Inspired Neural Network (PINN),” Arxiv, Jun 2022.
Ahmed B. Ayoub, Abhijit Roy, and D. Psaltis, “Optical Diffraction Tomography using nearly in-line holography with a broadband LED source,” Applied Sciences, Jan 2022.
Ahmed B. Ayoub, and D. Psaltis, “High speed, complex wavefront shaping using the digital micro-mirror device,” Scientific Reports, Sep 2021.
Amirhossein Saba, J. Lim, Ahmed B. Ayoub, Elizabeth E. Antoine, and D. Psaltis, “Polarization-sensitive optical diffraction tomography,” Optica, Mar 2021.
Ahmed B. Ayoub, J. Lim, Elizabeth E. Antoine, and D. Psaltis, “3D reconstruction of weakly scattering objects from 2D intensity-only measurements using the Wolf transform,” Optics Express, Jan 2021.
T. Thomson, Ahmed B. Ayoub, D. Psaltis, and H-A. Klok, “Fluorescence-based and Fluorescent label-free Characterization of Polymer Nanoparticle Decorated T cells,” ACS Biomacromolecules, Sep 2020.
J. Lim, Ahmed B. Ayoub and D. Psaltis, “Three-dimensional tomography of red blood cells using deep learning,” Advanced Photonics, vol. 2, no. 2, pp. 026001, Mar 2020.
T. Pham, E. Soubies, Ahmed B. Ayoub, J. Lim, D. Psaltis, and M. Unser, “Three-dimensional optical diffraction tomography with Lippmann-Schwinger model,” IEEE Transactions on Computational Imaging, vol. 6, pp. 727-738, Jan 2020.
Ahmed B. Ayoub, T. Pham, J. Lim, M. Unser, and D. Psaltis, “A method for assessing the fidelity of optical diffraction tomography reconstruction methods using structured illumination,” Optics Communications, vol. 454, pp. 124486, Jan 2020.
J. Lim, Ahmed B. Ayoub, Elizabeth E. Antoine, and D. Psaltis, “High-fidelity optical diffraction tomography of multiple scattering samples,” Light: Science and Applications, vol. 8, no. 1, pp. 1-12, Sep 2019.
Conference Papers
Amirhossein Saba, J. Lim, Ahmed B. Ayoub, Elizabeth E. Antoine, and D. Psaltis, “Tomographic diffraction microscopy of birefringence,” in Proceedings of OSA Digital Holography and Three-Dimensional Imaging, Jul 2021.
Ahmed B. Ayoub, and D. Psaltis, “Complex field representation using digital micromirror device (DMD),” in Proceedings of SPIE Digital Optical Technologies Conference, Jun 2021.
J. Lim, Ahmed B. Ayoub, and D. Psaltis, “Deep learning approach for solving the missing cone problem in optical diffraction tomography,” in Proceedings of Imaging and Applied Optics Congress, Washington DC, USA, Jun 2020.
Elizabeth E. Antoine, J. Lim, Ahmed B. Ayoub, and D. Psaltis, “Optical Diffraction Tomography (ODT) for Label-Free Imaging of Large 3D Biological Samples,” in Proceedings of Imaging and Applied Optics Congress, Washington DC, USA, Jun 2020.
T. Pham, E. Soubies, Ahmed B. Ayoub, J. Lim., D. Psaltis, and M. Unser, “Adaptive Regularization for Three-dimensional Optical Diffraction Tomography,” in Proceedings of IEEE 17th International Symposium on Biomedical Imaging, Iowa City, USA, Apr 2020.
J. Lim, Ahmed B. Ayoub, Elizabeth E. Antoine, and D. Psaltis, “Learning tomography plus for highly scattering samples,” in Proceedings of Imaging and Applied Optics 2019 Conference Munich, Germany, Jun 2019.
Ahmed B. Ayoub, J. Lim, Elizabeth E. Antoine, and D. Psaltis, “Optical Diffraction Tomography Based on a Spatial Light Modulator for Biological Imaging,” in Proceedings of Biophotonics Congress: Optics in the Life Sciences Congress 2019 Tucson, Arizona, USA, Apr 2019.
Teaching
Ecole Polytechnique Federale De Lausanne (EPFL)
Biomedical Optics (Master’s Level)
Leading a one-hour exercise session to help master students get involved more into the course by solving problems.
ICC - Practice: C ++ programming (Bachelor Level)
Contributing to exercise implementation and help in the exercise sessions if needed.
American University in Cairo (AUC)
Mathematical Physics (Master’s Level)
Helping master’s student to understand more the physical concept they have learned in the lecture sessions, help them in solving the exercise, and grading of the assignments and final exam.
Classical Mechanics (Bachelor Level)
Contributing to preparation of the exercises. In addition, My role included helping students in exercise sessions and grading of assignments.
Faculty of Engineering - Alexandria University
Digital Signal Processing (Bachelor Level)
My role in that course included preparation of the assignments, exercise sessions, and grading of assignments and final exam.
Digital Design Fundamentals (Bachelor Level)
Introducing students to fundamentals of the electronic digital design. My role was to lead a 2-hour exercise session with students to help them in writing codes to implement different electronic circuits and functionalities.